Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCL4P13236 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCL4P13236 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.03■□□□□ -0
CCL4P13236 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCL4P13236 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.03■□□□□ -0
CCL4P13236 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 SOCS2P1-201ENST00000417727 557 ntBASIC15.03■□□□□ -0
CCL4P13236 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.03■□□□□ -0
CCL4P13236 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.03■□□□□ -0
CCL4P13236 VDAC1P7-201ENST00000462417 847 ntBASIC15.03■□□□□ -0
CCL4P13236 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.03■□□□□ -0
CCL4P13236 HNRNPUP1-201ENST00000554987 333 ntBASIC15.03■□□□□ -0
CCL4P13236 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
CCL4P13236 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.03■□□□□ -0
CCL4P13236 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.03■□□□□ -0
CCL4P13236 MIR4538-201ENST00000581377 78 ntBASIC15.03■□□□□ -0
CCL4P13236 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.03■□□□□ -0
CCL4P13236 AL049840.4-201ENST00000602422 811 ntBASIC15.03■□□□□ -0
CCL4P13236 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCL4P13236 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.03■□□□□ -0
CCL4P13236 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
CCL4P13236 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL4P13236 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.03■□□□□ -0
CCL4P13236 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCL4P13236 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.02■□□□□ -0
CCL4P13236 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.02■□□□□ -0
CCL4P13236 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCL4P13236 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
CCL4P13236 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CCL4P13236 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCL4P13236 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCL4P13236 C1QBPP1-201ENST00000400117 770 ntBASIC15.02■□□□□ -0
CCL4P13236 AC099336.1-201ENST00000417053 1171 ntBASIC15.02■□□□□ -0
CCL4P13236 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.02■□□□□ -0
CCL4P13236 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.02■□□□□ -0
CCL4P13236 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CCL4P13236 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.02■□□□□ -0
CCL4P13236 AP001889.1-201ENST00000525414 633 ntBASIC15.02■□□□□ -0
CCL4P13236 AC068587.3-201ENST00000526613 355 ntBASIC15.02■□□□□ -0
CCL4P13236 ENPP7P5-201ENST00000541031 1031 ntBASIC15.02■□□□□ -0
CCL4P13236 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 PTP4A1P2-201ENST00000546033 454 ntBASIC15.02■□□□□ -0
CCL4P13236 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.02■□□□□ -0
CCL4P13236 AC120045.2-201ENST00000567334 178 ntBASIC15.02■□□□□ -0
CCL4P13236 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.02■□□□□ -0
CCL4P13236 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.02■□□□□ -0
CCL4P13236 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.02■□□□□ -0
CCL4P13236 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCL4P13236 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCL4P13236 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCL4P13236 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.02□□□□□ -0.01
CCL4P13236 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CCL4P13236 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL4P13236 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCL4P13236 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms