Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.7■□□□□ 0.1
PCNAP12004 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.7■□□□□ 0.1
PCNAP12004 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 AC007326.2-201ENST00000624224 7579 ntBASIC15.7■□□□□ 0.1
PCNAP12004 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.7■□□□□ 0.1
PCNAP12004 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.7■□□□□ 0.1
PCNAP12004 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.7■□□□□ 0.1
PCNAP12004 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCNAP12004 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PCNAP12004 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCNAP12004 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCNAP12004 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.69■□□□□ 0.1
PCNAP12004 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 MIR648-201ENST00000385046 94 ntBASIC15.69■□□□□ 0.1
PCNAP12004 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 AL355306.1-201ENST00000415580 579 ntBASIC15.69■□□□□ 0.1
PCNAP12004 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.69■□□□□ 0.1
PCNAP12004 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.69■□□□□ 0.1
PCNAP12004 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.69■□□□□ 0.1
PCNAP12004 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 AC073347.1-201ENST00000421633 2643 ntBASIC15.69■□□□□ 0.1
PCNAP12004 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.69■□□□□ 0.1
PCNAP12004 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCNAP12004 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCNAP12004 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
PCNAP12004 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.68■□□□□ 0.1
PCNAP12004 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PCNAP12004 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 AP003680.1-201ENST00000598970 3660 ntBASIC15.68■□□□□ 0.1
PCNAP12004 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCNAP12004 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.68■□□□□ 0.1
PCNAP12004 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.68■□□□□ 0.1
PCNAP12004 TFAMP1-201ENST00000412727 736 ntBASIC15.68■□□□□ 0.1
PCNAP12004 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PCNAP12004 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.68■□□□□ 0.1
PCNAP12004 PGAM5P1-201ENST00000518923 814 ntBASIC15.68■□□□□ 0.1
PCNAP12004 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PCNAP12004 AL135744.1-201ENST00000565098 629 ntBASIC15.68■□□□□ 0.1
PCNAP12004 AL138918.1-201ENST00000568306 659 ntBASIC15.68■□□□□ 0.1
PCNAP12004 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.68■□□□□ 0.1
PCNAP12004 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.68■□□□□ 0.1
PCNAP12004 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.68■□□□□ 0.1
PCNAP12004 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms