Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AL136379.1-201ENST00000623471 2642 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC132872.4-202ENST00000622924 2756 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 FAM220BP-201ENST00000377689 816 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC010740.1-201ENST00000417035 684 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC005034.1-201ENST00000426657 489 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC244107.1-201ENST00000442033 332 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 HLA-J-202ENST00000469281 1241 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC004890.2-204ENST00000481968 304 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 RNA5SP410-201ENST00000516285 106 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 ADAM3B-201ENST00000569937 840 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 CYP2T1P-202ENST00000641596 2535 ntBASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CCNYL3P0C7X3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AC006538.1-201ENST00000567905 1585 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 MTND6P24-201ENST00000440466 518 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 HLA-V-204ENST00000476601 1289 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AL358472.5-202ENST00000641448 1267 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 AL671710.1-201ENST00000610245 2349 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 CETN4P-206ENST00000642099 2168 ntBASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCNYL3P0C7X3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms