Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 AC023908.3-201ENST00000564211 3047 ntBASIC13.38□□□□□ -0.27
CTSDP07339 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CTSDP07339 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 AC005089.1-201ENST00000619486 2241 ntBASIC13.37□□□□□ -0.27
CTSDP07339 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.37□□□□□ -0.27
CTSDP07339 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 AC013726.1-201ENST00000563747 2285 ntBASIC13.37□□□□□ -0.27
CTSDP07339 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.37□□□□□ -0.27
CTSDP07339 AC092127.1-201ENST00000567093 3455 ntBASIC13.37□□□□□ -0.27
CTSDP07339 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
CTSDP07339 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 LAGE3P1-201ENST00000425356 484 ntBASIC13.37□□□□□ -0.27
CTSDP07339 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.37□□□□□ -0.27
CTSDP07339 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.37□□□□□ -0.27
CTSDP07339 MIR4515-201ENST00000584082 81 ntBASIC13.37□□□□□ -0.27
CTSDP07339 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.37□□□□□ -0.27
CTSDP07339 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CTSDP07339 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.37□□□□□ -0.27
CTSDP07339 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.37□□□□□ -0.27
CTSDP07339 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CTSDP07339 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 AC026748.1-201ENST00000624349 3251 ntBASIC13.36□□□□□ -0.27
CTSDP07339 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 PMS2P4-201ENST00000412466 1052 ntBASIC13.36□□□□□ -0.27
CTSDP07339 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSDP07339 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.36□□□□□ -0.27
CTSDP07339 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CTSDP07339 AL031055.1-201ENST00000606362 631 ntBASIC13.36□□□□□ -0.27
CTSDP07339 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
CTSDP07339 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CTSDP07339 AC091951.1-201ENST00000512854 2465 ntBASIC13.36□□□□□ -0.27
CTSDP07339 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.36□□□□□ -0.27
CTSDP07339 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CTSDP07339 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms