Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DOAP06340 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOAP06340 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DOAP06340 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DOAP06340 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 AC007389.4-201ENST00000454674 793 ntBASIC18.79■□□□□ 0.6
HLA-DOAP06340 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 IGHV3-71-201ENST00000523324 359 ntBASIC18.79■□□□□ 0.6
HLA-DOAP06340 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DOAP06340 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DOAP06340 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TOMM22P5-201ENST00000416399 439 ntBASIC18.78■□□□□ 0.6
HLA-DOAP06340 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 HILS1-202ENST00000545329 423 ntBASIC18.78■□□□□ 0.6
HLA-DOAP06340 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DOAP06340 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.78■□□□□ 0.6
HLA-DOAP06340 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DOAP06340 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DOAP06340 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DOAP06340 NKILA-202ENST00000614771 2598 ntBASIC18.77■□□□□ 0.6
HLA-DOAP06340 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DOAP06340 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DOAP06340 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 AL442647.2-201ENST00000429864 857 ntBASIC18.77■□□□□ 0.6
HLA-DOAP06340 FAM86LP-201ENST00000478302 853 ntBASIC18.77■□□□□ 0.6
HLA-DOAP06340 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.77■□□□□ 0.6
HLA-DOAP06340 AC106886.1-201ENST00000568660 600 ntBASIC18.77■□□□□ 0.6
HLA-DOAP06340 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms