Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 MYCLP1-201ENST00000372451 1075 ntBASIC15.99■□□□□ 0.15
CAPNS1P04632 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.99■□□□□ 0.15
CAPNS1P04632 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.99■□□□□ 0.15
CAPNS1P04632 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.99■□□□□ 0.15
CAPNS1P04632 AC027307.2-201ENST00000591252 911 ntBASIC15.99■□□□□ 0.15
CAPNS1P04632 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPNS1P04632 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.99■□□□□ 0.15
CAPNS1P04632 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 TNRC18P2-201ENST00000417666 2714 ntBASIC15.99■□□□□ 0.15
CAPNS1P04632 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CAPNS1P04632 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPNS1P04632 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CAPNS1P04632 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
CAPNS1P04632 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 HLA-V-204ENST00000476601 1289 ntBASIC15.98■□□□□ 0.15
CAPNS1P04632 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.98■□□□□ 0.15
CAPNS1P04632 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 RAB43P1-201ENST00000561790 589 ntBASIC15.98■□□□□ 0.15
CAPNS1P04632 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CAPNS1P04632 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.98■□□□□ 0.15
CAPNS1P04632 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CAPNS1P04632 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CAPNS1P04632 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CAPNS1P04632 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 WASH6P-202ENST00000359512 1437 ntBASIC15.97■□□□□ 0.15
CAPNS1P04632 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 FAM86MP-201ENST00000340703 885 ntBASIC15.97■□□□□ 0.15
CAPNS1P04632 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CAPNS1P04632 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.97■□□□□ 0.15
CAPNS1P04632 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CAPNS1P04632 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.97■□□□□ 0.15
CAPNS1P04632 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.97■□□□□ 0.15
CAPNS1P04632 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.97■□□□□ 0.15
CAPNS1P04632 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.97■□□□□ 0.15
CAPNS1P04632 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.97■□□□□ 0.15
CAPNS1P04632 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CAPNS1P04632 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms