Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 AL589702.1-201ENST00000641229 1509 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 KRT18P2-201ENST00000447938 1258 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNB1P01574 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNB1P01574 AC034105.1-201ENST00000563488 319 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNB1P01574 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNB1P01574 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.66■□□□□ 0.26
IFNB1P01574 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 PPT1-215ENST00000641471 2368 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
IFNB1P01574 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.66■□□□□ 0.26
IFNB1P01574 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 PMS2P7-201ENST00000506558 1336 ntBASIC16.66■□□□□ 0.26
IFNB1P01574 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
IFNB1P01574 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.66■□□□□ 0.26
IFNB1P01574 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 WASH6P-202ENST00000359512 1437 ntBASIC16.65■□□□□ 0.26
IFNB1P01574 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 PRYP6-201ENST00000514804 343 ntBASIC16.65■□□□□ 0.26
IFNB1P01574 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
IFNB1P01574 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
IFNB1P01574 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
IFNB1P01574 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
IFNB1P01574 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
IFNB1P01574 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
IFNB1P01574 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
IFNB1P01574 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
IFNB1P01574 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFNB1P01574 AC136621.1-201ENST00000624017 2304 ntBASIC16.64■□□□□ 0.25
IFNB1P01574 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNB1P01574 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.64■□□□□ 0.25
IFNB1P01574 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
IFNB1P01574 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
IFNB1P01574 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
IFNB1P01574 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms