Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.8■□□□□ 0.92
LTN1O94822 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LTN1O94822 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 B9D1-203ENST00000395615 805 ntTSL 3 BASIC20.8■□□□□ 0.92
LTN1O94822 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.8■□□□□ 0.92
LTN1O94822 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LTN1O94822 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.8■□□□□ 0.92
LTN1O94822 AC103810.3-201ENST00000583567 96 ntBASIC20.8■□□□□ 0.92
LTN1O94822 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC20.8■□□□□ 0.92
LTN1O94822 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LTN1O94822 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LTN1O94822 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 KLF2P2-201ENST00000416807 1039 ntBASIC20.79■□□□□ 0.92
LTN1O94822 EIF3FP3-201ENST00000434851 1086 ntBASIC20.79■□□□□ 0.92
LTN1O94822 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.79■□□□□ 0.92
LTN1O94822 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.79■□□□□ 0.92
LTN1O94822 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LTN1O94822 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LTN1O94822 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.79■□□□□ 0.92
LTN1O94822 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.78■□□□□ 0.92
LTN1O94822 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.78■□□□□ 0.92
LTN1O94822 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LTN1O94822 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
LTN1O94822 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 ACKR1-201ENST00000368121 1240 ntBASIC20.78■□□□□ 0.92
LTN1O94822 MIR663B-201ENST00000408361 115 ntBASIC20.78■□□□□ 0.92
LTN1O94822 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC20.78■□□□□ 0.92
LTN1O94822 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.78■□□□□ 0.92
LTN1O94822 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.78■□□□□ 0.92
LTN1O94822 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC20.78■□□□□ 0.92
LTN1O94822 AP006547.1-201ENST00000563435 692 ntBASIC20.78■□□□□ 0.92
LTN1O94822 AL021578.1-201ENST00000613646 709 ntBASIC20.78■□□□□ 0.92
LTN1O94822 AL096828.3-201ENST00000615354 462 ntBASIC20.78■□□□□ 0.92
LTN1O94822 AC006453.4-201ENST00000636949 1252 ntBASIC20.78■□□□□ 0.92
LTN1O94822 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.78■□□□□ 0.92
LTN1O94822 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.78■□□□□ 0.92
LTN1O94822 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LTN1O94822 AC018695.7-201ENST00000624587 2492 ntBASIC20.77■□□□□ 0.92
LTN1O94822 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
LTN1O94822 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
LTN1O94822 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.77■□□□□ 0.92
LTN1O94822 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC20.77■□□□□ 0.92
LTN1O94822 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
LTN1O94822 AC073413.1-201ENST00000603927 732 ntBASIC20.77■□□□□ 0.92
LTN1O94822 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.77■□□□□ 0.92
LTN1O94822 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.77■□□□□ 0.92
LTN1O94822 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LTN1O94822 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LTN1O94822 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.77■□□□□ 0.92
LTN1O94822 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
LTN1O94822 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms