Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
PFDN1O60925 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.31□□□□□ -0.12
PFDN1O60925 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.31□□□□□ -0.12
PFDN1O60925 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.31□□□□□ -0.12
PFDN1O60925 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
PFDN1O60925 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.31□□□□□ -0.12
PFDN1O60925 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
PFDN1O60925 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.31□□□□□ -0.12
PFDN1O60925 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
PFDN1O60925 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
PFDN1O60925 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.31□□□□□ -0.12
PFDN1O60925 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.3□□□□□ -0.12
PFDN1O60925 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.3□□□□□ -0.12
PFDN1O60925 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
PFDN1O60925 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.3□□□□□ -0.12
PFDN1O60925 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
PFDN1O60925 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 AC011700.1-201ENST00000610409 2627 ntBASIC14.3□□□□□ -0.12
PFDN1O60925 REXO1L1P-201ENST00000379010 6598 ntBASIC14.3□□□□□ -0.12
PFDN1O60925 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 GPR89P-201ENST00000407924 1495 ntBASIC14.3□□□□□ -0.12
PFDN1O60925 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PFDN1O60925 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 AP001972.5-201ENST00000624624 2338 ntBASIC14.3□□□□□ -0.12
PFDN1O60925 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 LINC00895-201ENST00000629028 1637 ntBASIC14.3□□□□□ -0.12
PFDN1O60925 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
PFDN1O60925 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.3□□□□□ -0.12
PFDN1O60925 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.29□□□□□ -0.12
PFDN1O60925 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.29□□□□□ -0.12
PFDN1O60925 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PFDN1O60925 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms