Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
GFRA3O60609 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 DPM3-202ENST00000368399 517 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 SLC25A1P3-201ENST00000395415 828 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 AC004987.2-201ENST00000395959 1148 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.35■□□□□ 0.05
GFRA3O60609 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 AP002803.1-201ENST00000528836 498 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 DNM1P30-201ENST00000563586 452 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 MIR4649-201ENST00000582839 64 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 AL023803.2-201ENST00000620080 638 ntBASIC15.35■□□□□ 0.05
GFRA3O60609 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.35■□□□□ 0.05
GFRA3O60609 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GFRA3O60609 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
GFRA3O60609 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
GFRA3O60609 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 AC090164.3-201ENST00000610780 2143 ntBASIC15.34■□□□□ 0.05
GFRA3O60609 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GFRA3O60609 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 MIR6842-201ENST00000612539 65 ntBASIC15.34■□□□□ 0.05
GFRA3O60609 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.34■□□□□ 0.05
GFRA3O60609 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GFRA3O60609 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
GFRA3O60609 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GFRA3O60609 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.33■□□□□ 0.05
GFRA3O60609 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
GFRA3O60609 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms