Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 CTBP1-AS2-206ENST00000581398 5652 ntBASIC11.04□□□□□ -0.64
NDUFA1O15239 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 SNX18-202ENST00000343017 3140 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.03□□□□□ -0.64
NDUFA1O15239 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.03□□□□□ -0.64
NDUFA1O15239 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 PAWRP1-201ENST00000451083 565 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 AC087163.2-201ENST00000457299 853 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.03□□□□□ -0.64
NDUFA1O15239 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
NDUFA1O15239 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 MTDHP4-201ENST00000600287 670 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 AL355877.3-201ENST00000622820 899 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 AC131009.4-201ENST00000624048 1740 ntBASIC11.03□□□□□ -0.64
NDUFA1O15239 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.03□□□□□ -0.64
NDUFA1O15239 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
NDUFA1O15239 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
NDUFA1O15239 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.02□□□□□ -0.64
NDUFA1O15239 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 GSN-203ENST00000373808 2664 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC11.02□□□□□ -0.64
NDUFA1O15239 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.02□□□□□ -0.64
NDUFA1O15239 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
NDUFA1O15239 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.64
NDUFA1O15239 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms