Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 CLEC4GP1-201ENST00000596555 870 ntBASIC16.71■□□□□ 0.27
CCDC188H7C350 AL009183.1-201ENST00000603760 355 ntBASIC16.71■□□□□ 0.27
CCDC188H7C350 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC188H7C350 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.71■□□□□ 0.27
CCDC188H7C350 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC188H7C350 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC188H7C350 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC188H7C350 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC188H7C350 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC188H7C350 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.71■□□□□ 0.26
CCDC188H7C350 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
CCDC188H7C350 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC188H7C350 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 AC106881.1-201ENST00000605849 3329 ntBASIC16.7■□□□□ 0.26
CCDC188H7C350 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 AC013726.1-201ENST00000563747 2285 ntBASIC16.7■□□□□ 0.26
CCDC188H7C350 AGAP7P-201ENST00000582299 2062 ntBASIC16.7■□□□□ 0.26
CCDC188H7C350 AGAP14-201ENST00000624701 2060 ntBASIC16.7■□□□□ 0.26
CCDC188H7C350 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CCDC188H7C350 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC188H7C350 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC188H7C350 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC188H7C350 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC188H7C350 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC188H7C350 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC188H7C350 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.7■□□□□ 0.26
CCDC188H7C350 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC188H7C350 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC188H7C350 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC188H7C350 AP002414.3-201ENST00000589352 1468 ntBASIC16.69■□□□□ 0.26
CCDC188H7C350 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC188H7C350 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC188H7C350 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC188H7C350 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CCDC188H7C350 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC188H7C350 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC188H7C350 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC188H7C350 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC188H7C350 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC188H7C350 RNPS1P1-201ENST00000507437 918 ntBASIC16.69■□□□□ 0.26
CCDC188H7C350 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC188H7C350 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC188H7C350 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC188H7C350 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC188H7C350 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.69■□□□□ 0.26
CCDC188H7C350 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms