Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 IFNL4P1-201ENST00000607083 540 ntBASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 AC020658.6-201ENST00000623564 1870 ntBASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
GOLGA6L4A6NEF3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 FAM197Y8-203ENST00000450145 560 ntBASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 MIR4751-201ENST00000578027 74 ntBASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 MST1L-201ENST00000442552 2185 ntBASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
GOLGA6L4A6NEF3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
GOLGA6L4A6NEF3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 AF186996.4-201ENST00000467186 377 ntBASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 AP002469.2-201ENST00000531724 424 ntBASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 AL365330.1-201ENST00000607459 531 ntBASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
GOLGA6L4A6NEF3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 TMBIM7P-203ENST00000641617 1718 ntBASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 AC087481.3-201ENST00000602886 1894 ntBASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 AC093724.1-201ENST00000448659 1027 ntBASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
GOLGA6L4A6NEF3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms