Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.07■□□□□ 0.32
RCCD1A6NED2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RCCD1A6NED2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 WASH6P-202ENST00000359512 1437 ntBASIC17.06■□□□□ 0.32
RCCD1A6NED2 AC025580.3-201ENST00000617932 1424 ntBASIC17.06■□□□□ 0.32
RCCD1A6NED2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AC127383.1-201ENST00000444697 1800 ntBASIC17.06■□□□□ 0.32
RCCD1A6NED2 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AC023141.13-201ENST00000604991 943 ntBASIC17.06■□□□□ 0.32
RCCD1A6NED2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AL773604.1-201ENST00000617417 272 ntBASIC17.06■□□□□ 0.32
RCCD1A6NED2 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
RCCD1A6NED2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RCCD1A6NED2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AL691432.1-201ENST00000596308 1422 ntBASIC17.05■□□□□ 0.32
RCCD1A6NED2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 MRPL3P1-201ENST00000400109 1033 ntBASIC17.05■□□□□ 0.32
RCCD1A6NED2 HCG24-202ENST00000414398 717 ntTSL 3 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RCCD1A6NED2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.05■□□□□ 0.32
RCCD1A6NED2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RCCD1A6NED2 AC026748.1-201ENST00000624349 3251 ntBASIC17.04■□□□□ 0.32
RCCD1A6NED2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.04■□□□□ 0.32
RCCD1A6NED2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms