Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 MTND6P24-201ENST00000440466 518 ntBASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 TUBB3P1-201ENST00000405796 1332 ntBASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC196A0A1B0GTZ2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CCDC196A0A1B0GTZ2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 FO393414.2-201ENST00000405153 598 ntBASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC196A0A1B0GTZ2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC007950.2-201ENST00000615045 2347 ntBASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AL450472.2-201ENST00000603663 1156 ntBASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC196A0A1B0GTZ2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms