Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 AL031008.1-201ENST00000619963 541 ntBASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 REXO1L8P-201ENST00000604378 1897 ntBASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.56■□□□□ 0.08
RNF103-CHMP3A0A140T963 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAM45BP-202ENST00000592932 1624 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC108751.1-201ENST00000490852 363 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 MIR7706-201ENST00000613747 67 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AL773604.1-201ENST00000617417 272 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP003680.1-201ENST00000598970 3660 ntBASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RNF103-CHMP3A0A140T963 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAM185BP-201ENST00000443595 716 ntBASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 FAAHP1-202ENST00000446499 1238 ntBASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RNF103-CHMP3A0A140T963 AL049840.3-201ENST00000602669 611 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms