Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 AKR7A2P1-201ENST00000460134 915 ntBASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 ACTG1P17-201ENST00000558391 1119 ntBASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC132938.4-201ENST00000623835 848 ntBASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
LOC102724428A0A0B4J2F2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 HCG11-201ENST00000411553 5696 ntBASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC018892.3-201ENST00000623986 2499 ntBASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 KRT18P25-201ENST00000508931 1278 ntBASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 AC244452.3-201ENST00000636814 210 ntBASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.11■□□□□ 0.81
LOC102724428A0A0B4J2F2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AL133267.1-201ENST00000398220 340 ntBASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AL590640.2-201ENST00000457038 527 ntBASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 RPSAP36-202ENST00000494591 1261 ntBASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AP006547.1-201ENST00000563435 692 ntBASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
LOC102724428A0A0B4J2F2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms