Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AC073439.1-201ENST00000624121 1774 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 DNAJB3-201ENST00000446806 729 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 PRYP6-201ENST00000514804 343 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 C20orf181-201ENST00000623918 480 ntBASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HLA-DRB4X5D2U9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AL671277.1-201ENST00000429656 993 ntBASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AP000347.1-202ENST00000435868 847 ntBASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 MKNK2P1-201ENST00000437526 628 ntBASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AL135744.1-201ENST00000565098 629 ntBASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 AC092902.6-201ENST00000641783 218 ntBASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HLA-DRB4X5D2U9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
HLA-DRB4X5D2U9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms