Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 AC013467.2-201ENST00000605472 835 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 GGTLC5P-201ENST00000617623 998 ntBASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4B1Q9Y6B7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 AL671710.1-201ENST00000610245 2349 ntBASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.52■□□□□ 0.07
AP4B1Q9Y6B7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 ZNF259P1-201ENST00000407656 1365 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AC006277.1-201ENST00000624348 1610 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AL022342.1-201ENST00000400363 863 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 PTCHD3P3-201ENST00000403073 906 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 RNA5SP415-201ENST00000517246 115 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AC145285.3-201ENST00000564603 959 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 AC008667.4-201ENST00000607370 168 ntBASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4B1Q9Y6B7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 IGHV3-65-201ENST00000523210 341 ntBASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 UNC93B6-202ENST00000528242 690 ntBASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 Z83851.2-201ENST00000609564 659 ntBASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
AP4B1Q9Y6B7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms