Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AL355802.2-201ENST00000402069 882 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 SLC25A1P2-201ENST00000430693 912 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AC068472.1-201ENST00000474589 881 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 BX088651.1-201ENST00000540551 451 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AC087623.3-201ENST00000607047 1098 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AL356585.2-201ENST00000625078 2396 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 GPAA1P2-202ENST00000606848 1787 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 KRT8P39-201ENST00000396270 1433 ntBASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 ESRRAP1-201ENST00000400596 1257 ntBASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 AC007967.3-201ENST00000434308 558 ntBASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 GUSBP6-202ENST00000438529 1198 ntBASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 CDCA4P2-201ENST00000441182 718 ntBASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAPPC1Q9Y5R8 AC010654.1-201ENST00000615722 808 ntBASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms