Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.65■□□□□ 0.26
YIPF1Q9Y548 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
YIPF1Q9Y548 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
YIPF1Q9Y548 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 BRI3BPP1-201ENST00000594224 787 ntBASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AC097359.3-201ENST00000603982 1210 ntBASIC16.64■□□□□ 0.25
YIPF1Q9Y548 MIR6805-201ENST00000615055 62 ntBASIC16.64■□□□□ 0.25
YIPF1Q9Y548 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 AL607033.1-201ENST00000623900 1599 ntBASIC16.64■□□□□ 0.25
YIPF1Q9Y548 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
YIPF1Q9Y548 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 MIR658-201ENST00000385210 100 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AL162726.2-201ENST00000438986 1017 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AL512343.1-201ENST00000605837 169 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 CU634019.7-201ENST00000624153 1185 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 FP236241.2-201ENST00000624906 1185 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 NKILA-202ENST00000614771 2598 ntBASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
YIPF1Q9Y548 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
YIPF1Q9Y548 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms