Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 YBX1P6-201ENST00000442962 1002 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 RPS2P36-201ENST00000456516 831 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC091167.2-201ENST00000579581 588 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AP001198.2-201ENST00000593121 466 ntTSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 SPCS2P2-201ENST00000603270 608 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AL133215.2-201ENST00000609242 977 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AL022328.1-201ENST00000610050 478 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AC073578.4-201ENST00000623945 514 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AL162727.3-201ENST00000635661 2787 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LHX6Q9UPM6 UBALD1-205ENST00000590891 2641 ntBASIC15.3■□□□□ 0.04
LHX6Q9UPM6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 NFIC-211ENST00000641145 8399 ntBASIC15.29■□□□□ 0.04
LHX6Q9UPM6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 SERBP1P3-201ENST00000459980 809 ntBASIC15.29■□□□□ 0.04
LHX6Q9UPM6 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 AL355312.1-201ENST00000407115 2176 ntBASIC15.29■□□□□ 0.04
LHX6Q9UPM6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LHX6Q9UPM6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 TOP3BP1-201ENST00000420768 1380 ntBASIC15.28■□□□□ 0.04
LHX6Q9UPM6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC105129.2-201ENST00000559536 390 ntBASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC087762.1-201ENST00000559755 643 ntTSL 3 BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LHX6Q9UPM6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms