Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 AL049840.3-201ENST00000602669 611 ntBASIC14.38□□□□□ -0.11
COPS3Q9UNS2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COPS3Q9UNS2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 MIR7706-201ENST00000613747 67 ntBASIC14.37□□□□□ -0.11
COPS3Q9UNS2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COPS3Q9UNS2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AC067930.6-201ENST00000623257 4947 ntBASIC14.36□□□□□ -0.11
COPS3Q9UNS2 RPS2P28-201ENST00000314255 741 ntBASIC14.36□□□□□ -0.11
COPS3Q9UNS2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AC079781.3-201ENST00000449110 356 ntBASIC14.36□□□□□ -0.11
COPS3Q9UNS2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.36□□□□□ -0.11
COPS3Q9UNS2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms