Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 AC004461.2-201ENST00000629517 803 ntBASIC16.37■□□□□ 0.21
EBF1Q9UH73 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 AC079328.2-201ENST00000561241 3354 ntBASIC16.37■□□□□ 0.21
EBF1Q9UH73 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.37■□□□□ 0.21
EBF1Q9UH73 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
EBF1Q9UH73 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 MYCLP2-201ENST00000449268 967 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC022210.1-201ENST00000449856 793 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 RN7SL837P-201ENST00000463010 287 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 TPRX2P-201ENST00000535362 881 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC020765.3-201ENST00000613051 740 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 MIR6069-201ENST00000620069 79 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 AC060834.1-201ENST00000443027 2032 ntBASIC16.36■□□□□ 0.21
EBF1Q9UH73 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
EBF1Q9UH73 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.36■□□□□ 0.21
EBF1Q9UH73 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.35■□□□□ 0.21
EBF1Q9UH73 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 MIR658-201ENST00000385210 100 ntBASIC16.35■□□□□ 0.21
EBF1Q9UH73 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
EBF1Q9UH73 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
EBF1Q9UH73 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms