Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 DFFBP1-201ENST00000433250 979 ntBASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 DBET-201ENST00000630918 3363 ntBASIC17.02■□□□□ 0.32
ARHGEF3Q9NR81 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 AC144831.1-201ENST00000573312 2656 ntBASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ARHGEF3Q9NR81 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 AL512384.1-201ENST00000406683 331 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 RPL37AP1-201ENST00000412502 279 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 RN7SL752P-201ENST00000463779 287 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 PRYP6-201ENST00000514804 343 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 AC004840.1-201ENST00000636359 365 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 EGFEM1P-202ENST00000431685 1563 ntBASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ARHGEF3Q9NR81 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 LINC00895-201ENST00000629028 1637 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 SLC25A1P3-201ENST00000395415 828 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 DGCR5-201ENST00000399539 862 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 AC087499.6-201ENST00000411576 835 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 RPS2P32-201ENST00000439199 892 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 AC135586.1-201ENST00000539323 574 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 CYP2A7P1-201ENST00000595391 815 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 AL162274.1-201ENST00000617191 1098 ntBASIC17■□□□□ 0.31
ARHGEF3Q9NR81 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17■□□□□ 0.31
ARHGEF3Q9NR81 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms