Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 KRT8P12-202ENST00000472924 1397 ntBASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 AC026691.1-201ENST00000602502 2017 ntBASIC15.21■□□□□ 0.02
MKKSQ9NPJ1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 MIR4745-201ENST00000577608 62 ntBASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 PCDH8P1-201ENST00000428983 2773 ntBASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MKKSQ9NPJ1 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AC022144.1-201ENST00000602255 1580 ntBASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AC243562.2-201ENST00000561247 970 ntBASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 AL391005.1-201ENST00000623953 2435 ntBASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MKKSQ9NPJ1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms