Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SDHAP3-202ENST00000515467 728 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SNX29P1-201ENST00000548357 1007 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 AC007950.2-201ENST00000615045 2347 ntBASIC14.18□□□□□ -0.14
KIAA1549Q9HCM3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AL133267.1-201ENST00000398220 340 ntBASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC008735.3-201ENST00000596646 500 ntBASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 AC018892.3-201ENST00000623986 2499 ntBASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
KIAA1549Q9HCM3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 INE1-201ENST00000456273 945 ntBASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 CR383656.12-201ENST00000549567 513 ntBASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 WFDC1-204ENST00000613603 549 ntBASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.16□□□□□ -0.14
KIAA1549Q9HCM3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms