Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC245100.5-201ENST00000452108 331 ntBASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 SERBP1P5-201ENST00000510079 1181 ntBASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAT1LQ9HCJ6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.58■□□□□ 0.57
VAT1LQ9HCJ6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 MIR6069-201ENST00000620069 79 ntBASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 AC004840.1-201ENST00000636359 365 ntBASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.58■□□□□ 0.56
VAT1LQ9HCJ6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 HIST3H2BA-201ENST00000436555 524 ntBASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SERBP1P3-201ENST00000459980 809 ntBASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 AC008761.3-201ENST00000624803 892 ntBASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 KRT8P37-201ENST00000451609 1420 ntBASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.57■□□□□ 0.56
VAT1LQ9HCJ6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAT1LQ9HCJ6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms