Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AC007950.2-201ENST00000615045 2347 ntBASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AC097376.2-205ENST00000610159 5334 ntBASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AC040169.1-201ENST00000565382 521 ntBASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 AC010491.1-201ENST00000563101 2797 ntBASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCDC68Q9H2F9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 TCAF2P1-201ENST00000291129 2421 ntBASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 AC023274.1-201ENST00000418278 595 ntBASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 PAUPAR-201ENST00000630360 2965 ntBASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 LINC02447-202ENST00000501888 2146 ntBASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 OR2I1P-209ENST00000641730 5365 ntBASIC16.18■□□□□ 0.18
CCDC68Q9H2F9 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AC105917.1-201ENST00000506637 2539 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 CDC14C-201ENST00000428251 1719 ntBASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.17■□□□□ 0.18
CCDC68Q9H2F9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms