Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AL356488.2-201ENST00000602755 427 ntBASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 AC136621.1-201ENST00000624017 2304 ntBASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COMMD4Q9H0A8 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AF238378.1-201ENST00000526806 358 ntBASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 CLEC4GP1-201ENST00000596555 870 ntBASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AC008735.5-201ENST00000623544 497 ntBASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AL645728.2-201ENST00000641974 660 ntBASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.24□□□□□ -0.13
COMMD4Q9H0A8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 AC092850.2-201ENST00000623821 2697 ntBASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 AP002469.2-201ENST00000531724 424 ntBASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 AC105339.3-201ENST00000560043 636 ntBASIC14.23□□□□□ -0.13
COMMD4Q9H0A8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms