Protein–RNA interactions for Protein: Q9BVR0

HERC2P3, Putative HERC2-like protein 3, humanhuman

Predictions only

Length 1,158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2P3Q9BVR0 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC2P3Q9BVR0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.89■□□□□ 0.3
HERC2P3Q9BVR0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HERC2P3Q9BVR0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
HERC2P3Q9BVR0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HERC2P3Q9BVR0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HERC2P3Q9BVR0 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 ANKRD19P-201ENST00000338192 862 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 KRT18P64-201ENST00000434946 1219 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 PHKG1P2-201ENST00000457537 863 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AL359711.2-201ENST00000563105 872 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 AC018665.1-201ENST00000622927 1362 ntBASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC2P3Q9BVR0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 AC136604.1-201ENST00000418535 575 ntBASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 ACTG1P3-201ENST00000431775 1114 ntBASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 AC104989.1-201ENST00000519711 778 ntBASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HERC2P3Q9BVR0 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms