Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.41■□□□□ 0.54
ARID3AQ99856 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.41■□□□□ 0.54
ARID3AQ99856 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.41■□□□□ 0.54
ARID3AQ99856 LAGE3P1-201ENST00000425356 484 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.41■□□□□ 0.54
ARID3AQ99856 OR7E14P-202ENST00000530490 1290 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.41■□□□□ 0.54
ARID3AQ99856 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 ALOX12P2-203ENST00000570921 1945 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.4■□□□□ 0.54
ARID3AQ99856 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 AF186996.4-201ENST00000467186 377 ntBASIC18.4■□□□□ 0.54
ARID3AQ99856 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC18.4■□□□□ 0.54
ARID3AQ99856 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.4■□□□□ 0.54
ARID3AQ99856 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ARID3AQ99856 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
ARID3AQ99856 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARID3AQ99856 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ARID3AQ99856 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARID3AQ99856 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ARID3AQ99856 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC18.39■□□□□ 0.54
ARID3AQ99856 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
ARID3AQ99856 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.39■□□□□ 0.54
ARID3AQ99856 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.39■□□□□ 0.54
ARID3AQ99856 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
ARID3AQ99856 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC18.39■□□□□ 0.54
ARID3AQ99856 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ARID3AQ99856 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
ARID3AQ99856 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.39■□□□□ 0.53
ARID3AQ99856 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 KRT18P27-201ENST00000427733 1299 ntBASIC18.39■□□□□ 0.53
ARID3AQ99856 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.39■□□□□ 0.53
ARID3AQ99856 SLC25A6P4-201ENST00000586535 553 ntBASIC18.39■□□□□ 0.53
ARID3AQ99856 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.39■□□□□ 0.53
ARID3AQ99856 MIR7706-201ENST00000613747 67 ntBASIC18.39■□□□□ 0.53
ARID3AQ99856 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ARID3AQ99856 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ARID3AQ99856 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ARID3AQ99856 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms