Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 AL590640.2-201ENST00000457038 527 ntBASIC16.25■□□□□ 0.19
NOTCH4Q99466 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 AC078819.1-201ENST00000547454 765 ntBASIC16.25■□□□□ 0.19
NOTCH4Q99466 AC012085.1-201ENST00000548270 765 ntBASIC16.25■□□□□ 0.19
NOTCH4Q99466 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.25■□□□□ 0.19
NOTCH4Q99466 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NOTCH4Q99466 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 FAM86HP-204ENST00000513466 959 ntBASIC16.24■□□□□ 0.19
NOTCH4Q99466 AP001582.1-201ENST00000525856 295 ntBASIC16.24■□□□□ 0.19
NOTCH4Q99466 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 AC079328.2-201ENST00000561241 3354 ntBASIC16.24■□□□□ 0.19
NOTCH4Q99466 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.24■□□□□ 0.19
NOTCH4Q99466 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NOTCH4Q99466 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 AC145423.3-201ENST00000615987 467 ntBASIC16.23■□□□□ 0.19
NOTCH4Q99466 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NOTCH4Q99466 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms