Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 AC138969.3-201ENST00000546612 1459 ntBASIC13.08□□□□□ -0.32
ZNF48Q96MX3 AC138932.2-201ENST00000548268 1459 ntBASIC13.08□□□□□ -0.32
ZNF48Q96MX3 AC126755.4-201ENST00000549796 1459 ntBASIC13.08□□□□□ -0.32
ZNF48Q96MX3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZNF48Q96MX3 KRT8P12-202ENST00000472924 1397 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 DOC2GP-204ENST00000639052 2548 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 DFFBP1-201ENST00000433250 979 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 AC007274.1-201ENST00000439805 662 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 DOC2GP-202ENST00000514950 1163 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 WASH4P-201ENST00000564273 1246 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 CHCHD2P3-201ENST00000603038 451 ntBASIC13.07□□□□□ -0.32
ZNF48Q96MX3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.07□□□□□ -0.32
ZNF48Q96MX3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 AL513523.2-202ENST00000427283 2040 ntBASIC13.06□□□□□ -0.32
ZNF48Q96MX3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SPDYE17-201ENST00000412399 783 ntBASIC13.06□□□□□ -0.32
ZNF48Q96MX3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 U91328.1-201ENST00000437528 223 ntBASIC13.06□□□□□ -0.32
ZNF48Q96MX3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 SERBP1P3-201ENST00000459980 809 ntBASIC13.06□□□□□ -0.32
ZNF48Q96MX3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.06□□□□□ -0.32
ZNF48Q96MX3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms