Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 CYMP-203ENST00000474680 1263 ntBASIC16.34■□□□□ 0.21
RTP4Q96DX8 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.34■□□□□ 0.21
RTP4Q96DX8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 KRT8P37-201ENST00000451609 1420 ntBASIC16.34■□□□□ 0.21
RTP4Q96DX8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 AP3S2-216ENST00000617003 1561 ntBASIC16.34■□□□□ 0.21
RTP4Q96DX8 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.34■□□□□ 0.21
RTP4Q96DX8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RTP4Q96DX8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTP4Q96DX8 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.33■□□□□ 0.21
RTP4Q96DX8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.33■□□□□ 0.21
RTP4Q96DX8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RTP4Q96DX8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.33■□□□□ 0.21
RTP4Q96DX8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTP4Q96DX8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RTP4Q96DX8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 IGHV3-62-201ENST00000520057 340 ntBASIC16.33■□□□□ 0.2
RTP4Q96DX8 SLC25A39P2-201ENST00000537614 270 ntBASIC16.33■□□□□ 0.2
RTP4Q96DX8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 AC027612.4-201ENST00000605371 583 ntBASIC16.33■□□□□ 0.2
RTP4Q96DX8 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 AC112693.3-201ENST00000624819 1983 ntBASIC16.33■□□□□ 0.2
RTP4Q96DX8 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RTP4Q96DX8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RTP4Q96DX8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AL645939.2-201ENST00000427340 991 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 TIMM8BP1-201ENST00000452384 211 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 AP000344.2-201ENST00000512987 629 ntBASIC16.32■□□□□ 0.2
RTP4Q96DX8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RTP4Q96DX8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.32■□□□□ 0.2
RTP4Q96DX8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms