Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 TP73-AS1-210ENST00000637775 1455 ntBASIC12.06□□□□□ -0.48
NUP35Q8NFH5 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.06□□□□□ -0.48
NUP35Q8NFH5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AC015656.1-201ENST00000624209 3578 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 TSPY22P-201ENST00000427496 604 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 PMS2P1-201ENST00000431037 1228 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 SNORA78-201ENST00000459373 127 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 REXO1L3P-201ENST00000622202 1288 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AP000867.4-201ENST00000641616 219 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 SLC22A20-204ENST00000530038 1673 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 KRT8P44-201ENST00000441609 1350 ntBASIC12.05□□□□□ -0.48
NUP35Q8NFH5 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NUP35Q8NFH5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NUP35Q8NFH5 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms