Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 AC069224.1-201ENST00000566372 1715 ntBASIC14.09□□□□□ -0.15
CPEB3Q8NE35 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 TCAF2P1-201ENST00000291129 2421 ntBASIC14.09□□□□□ -0.15
CPEB3Q8NE35 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.09□□□□□ -0.15
CPEB3Q8NE35 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CPEB3Q8NE35 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 AC112504.1-201ENST00000623415 1841 ntBASIC14.08□□□□□ -0.16
CPEB3Q8NE35 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 AL365203.3-201ENST00000609742 2057 ntBASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CPEB3Q8NE35 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 AL139400.1-201ENST00000366220 510 ntBASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 AC018529.1-201ENST00000613063 361 ntBASIC14.07□□□□□ -0.16
CPEB3Q8NE35 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CPEB3Q8NE35 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms