Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 GPS2P2-201ENST00000430745 888 ntBASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 AC079781.4-201ENST00000641908 219 ntBASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
C11orf42Q8N5U0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
C11orf42Q8N5U0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AL589702.1-201ENST00000641229 1509 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AC092364.2-201ENST00000596710 2692 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 IGHV3-62-201ENST00000520057 340 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 SLC25A39P2-201ENST00000537614 270 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 SNHG9-202ENST00000564014 471 ntBASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.45□□□□□ -0.26
C11orf42Q8N5U0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.44□□□□□ -0.26
C11orf42Q8N5U0 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms