Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 AC022188.1-201ENST00000620960 1664 ntBASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC33Q8N5R6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 PRAL-201ENST00000624952 3286 ntBASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 FAM207CP-201ENST00000443486 507 ntBASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AC027369.6-201ENST00000525520 931 ntBASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
CCDC33Q8N5R6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC33Q8N5R6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC33Q8N5R6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
CCDC33Q8N5R6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC33Q8N5R6 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 AL513523.2-202ENST00000427283 2040 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 AC241585.1-201ENST00000433527 519 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 AC012645.4-201ENST00000610691 1061 ntBASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC33Q8N5R6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 AC073439.1-201ENST00000624121 1774 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms