Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC099336.1-201ENST00000417053 1171 ntBASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AL359711.2-201ENST00000563105 872 ntBASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 MIR6787-201ENST00000616675 61 ntBASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEFF1Q8IYR6 KRT8P44-201ENST00000441609 1350 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AL691432.1-201ENST00000596308 1422 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AGGF1P2-201ENST00000426656 2106 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 FAM86LP-201ENST00000478302 853 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 MIR6869-201ENST00000619434 62 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 AC009053.2-201ENST00000563701 2365 ntBASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TMEFF1Q8IYR6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 GGT3P-204ENST00000453783 1664 ntBASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 AC004987.2-201ENST00000395959 1148 ntBASIC15.86■□□□□ 0.13
TMEFF1Q8IYR6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms