Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 OR8S1-201ENST00000310194 1080 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 EEF1DP4-201ENST00000446006 880 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC245100.5-201ENST00000452108 331 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC243562.2-201ENST00000561247 970 ntBASIC17.86■□□□□ 0.45
TRIM50Q86XT4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM50Q86XT4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AC092364.2-201ENST00000596710 2692 ntBASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AL662844.4-201ENST00000606367 2838 ntBASIC17.85■□□□□ 0.45
TRIM50Q86XT4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AC074338.1-201ENST00000416825 156 ntBASIC17.85■□□□□ 0.45
TRIM50Q86XT4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM50Q86XT4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 Z97205.2-201ENST00000564697 1639 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 AL512384.1-201ENST00000406683 331 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 GIMAP3P-201ENST00000495150 836 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 AC099568.2-201ENST00000609194 695 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 MIR8072-201ENST00000614241 80 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 FER1L4-210ENST00000615531 5998 ntBASIC17.84■□□□□ 0.45
TRIM50Q86XT4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM50Q86XT4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms