Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.06■□□□□ 0.16
LDB1Q86U70 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.06■□□□□ 0.16
LDB1Q86U70 AL513210.1-201ENST00000629608 234 ntBASIC16.06■□□□□ 0.16
LDB1Q86U70 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.06■□□□□ 0.16
LDB1Q86U70 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LDB1Q86U70 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LDB1Q86U70 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 AL136982.4-201ENST00000437689 1740 ntBASIC16.05■□□□□ 0.16
LDB1Q86U70 AC092850.2-201ENST00000623821 2697 ntBASIC16.05■□□□□ 0.16
LDB1Q86U70 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LDB1Q86U70 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB1Q86U70 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.05■□□□□ 0.16
LDB1Q86U70 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB1Q86U70 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 FAM220BP-201ENST00000377689 816 ntBASIC16.05■□□□□ 0.16
LDB1Q86U70 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.05■□□□□ 0.16
LDB1Q86U70 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.05■□□□□ 0.16
LDB1Q86U70 AC024267.1-201ENST00000582320 895 ntBASIC16.05■□□□□ 0.16
LDB1Q86U70 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.05■□□□□ 0.16
LDB1Q86U70 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB1Q86U70 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LDB1Q86U70 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LDB1Q86U70 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.05■□□□□ 0.16
LDB1Q86U70 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LDB1Q86U70 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LDB1Q86U70 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.04■□□□□ 0.16
LDB1Q86U70 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.04■□□□□ 0.16
LDB1Q86U70 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.04■□□□□ 0.16
LDB1Q86U70 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.04■□□□□ 0.16
LDB1Q86U70 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.04■□□□□ 0.16
LDB1Q86U70 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.04■□□□□ 0.16
LDB1Q86U70 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LDB1Q86U70 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LDB1Q86U70 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LDB1Q86U70 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.03■□□□□ 0.16
LDB1Q86U70 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.03■□□□□ 0.16
LDB1Q86U70 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms