Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 AL596087.1-201ENST00000400979 1969 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 AL691432.1-201ENST00000596308 1422 ntBASIC15.41■□□□□ 0.06
RNF44Q7L0R7 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RNF44Q7L0R7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AP001282.1-201ENST00000531301 1499 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 CYP2T1P-202ENST00000641596 2535 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 HMGN1P19-201ENST00000436976 333 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC093214.1-201ENST00000511688 1107 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC027369.6-201ENST00000525520 931 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AL390754.1-201ENST00000619088 582 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC100757.3-201ENST00000622361 1406 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AC067930.6-201ENST00000623257 4947 ntBASIC15.4■□□□□ 0.06
RNF44Q7L0R7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF44Q7L0R7 AL662844.4-201ENST00000606367 2838 ntBASIC15.39■□□□□ 0.06
RNF44Q7L0R7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 KRT8P12-202ENST00000472924 1397 ntBASIC15.39■□□□□ 0.05
RNF44Q7L0R7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AC004987.2-201ENST00000395959 1148 ntBASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 BASP1P1-201ENST00000430708 665 ntBASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AC241585.1-201ENST00000433527 519 ntBASIC15.39■□□□□ 0.05
RNF44Q7L0R7 EEF1DP4-201ENST00000446006 880 ntBASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF44Q7L0R7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms