Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AL596257.1-201ENST00000641463 2694 ntBASIC16.46■□□□□ 0.23
CASC4Q6P4E1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CASC4Q6P4E1 AC073439.1-201ENST00000624121 1774 ntBASIC16.46■□□□□ 0.22
CASC4Q6P4E1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CASC4Q6P4E1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.46■□□□□ 0.22
CASC4Q6P4E1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.46■□□□□ 0.22
CASC4Q6P4E1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CASC4Q6P4E1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
CASC4Q6P4E1 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AC034105.1-201ENST00000563488 319 ntBASIC16.45■□□□□ 0.22
CASC4Q6P4E1 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.45■□□□□ 0.22
CASC4Q6P4E1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 AC144831.1-201ENST00000573312 2656 ntBASIC16.44■□□□□ 0.22
CASC4Q6P4E1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 RPL13AP23-201ENST00000480739 586 ntBASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 AC145285.3-201ENST00000564603 959 ntBASIC16.44■□□□□ 0.22
CASC4Q6P4E1 AL365330.1-201ENST00000607459 531 ntBASIC16.44■□□□□ 0.22
CASC4Q6P4E1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.44■□□□□ 0.22
CASC4Q6P4E1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms