Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NIPAL3Q6P499 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.66□□□□□ -0.06
NIPAL3Q6P499 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AL355306.1-201ENST00000415580 579 ntBASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AL671277.1-201ENST00000429656 993 ntBASIC14.66□□□□□ -0.06
NIPAL3Q6P499 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AC068418.2-201ENST00000577309 3703 ntBASIC14.66□□□□□ -0.06
NIPAL3Q6P499 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.66□□□□□ -0.06
NIPAL3Q6P499 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 AC092850.2-201ENST00000623821 2697 ntBASIC14.65□□□□□ -0.06
NIPAL3Q6P499 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 MKNK2P1-201ENST00000437526 628 ntBASIC14.65□□□□□ -0.06
NIPAL3Q6P499 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.65□□□□□ -0.06
NIPAL3Q6P499 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 AC005829.1-201ENST00000570002 483 ntBASIC14.65□□□□□ -0.06
NIPAL3Q6P499 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.65□□□□□ -0.06
NIPAL3Q6P499 AC006058.4-201ENST00000624016 1670 ntBASIC14.65□□□□□ -0.06
NIPAL3Q6P499 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NIPAL3Q6P499 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NIPAL3Q6P499 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms