Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
SSBP1Q04837 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.63□□□□□ -0.23
SSBP1Q04837 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SSBP1Q04837 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
SSBP1Q04837 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SSBP1Q04837 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SSBP1Q04837 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SSBP1Q04837 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 AL645939.2-201ENST00000427340 991 ntBASIC13.62□□□□□ -0.23
SSBP1Q04837 AC104819.1-201ENST00000504587 486 ntBASIC13.62□□□□□ -0.23
SSBP1Q04837 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.62□□□□□ -0.23
SSBP1Q04837 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.62□□□□□ -0.23
SSBP1Q04837 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SSBP1Q04837 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP1Q04837 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.61□□□□□ -0.23
SSBP1Q04837 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
SSBP1Q04837 AC005912.2-201ENST00000619492 2400 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SSBP1Q04837 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 PMS2P4-201ENST00000412466 1052 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 RBM17P3-201ENST00000417687 1192 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
SSBP1Q04837 FAM8A3P-201ENST00000427218 844 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 KRT18P57-201ENST00000443599 1254 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP1Q04837 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.61□□□□□ -0.23
SSBP1Q04837 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 MIR4321-201ENST00000592276 80 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 AL591684.3-201ENST00000605187 298 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 AP001269.4-201ENST00000609611 512 ntBASIC13.61□□□□□ -0.23
SSBP1Q04837 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
SSBP1Q04837 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SSBP1Q04837 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms