Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.71■□□□□ 0.59
IRX3P78415 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
IRX3P78415 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 AC098850.1-201ENST00000419919 790 ntBASIC18.71■□□□□ 0.59
IRX3P78415 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.71■□□□□ 0.59
IRX3P78415 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.71■□□□□ 0.59
IRX3P78415 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 AC092337.1-201ENST00000568699 1129 ntBASIC18.71■□□□□ 0.59
IRX3P78415 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.71■□□□□ 0.59
IRX3P78415 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.71■□□□□ 0.59
IRX3P78415 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.71■□□□□ 0.59
IRX3P78415 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.71■□□□□ 0.59
IRX3P78415 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.71■□□□□ 0.59
IRX3P78415 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 AC006538.1-201ENST00000567905 1585 ntBASIC18.71■□□□□ 0.59
IRX3P78415 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.71■□□□□ 0.59
IRX3P78415 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IRX3P78415 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
IRX3P78415 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.7■□□□□ 0.58
IRX3P78415 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
IRX3P78415 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
IRX3P78415 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
IRX3P78415 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.7■□□□□ 0.58
IRX3P78415 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 AC022210.1-201ENST00000449856 793 ntBASIC18.7■□□□□ 0.58
IRX3P78415 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.7■□□□□ 0.58
IRX3P78415 RRP7BP-205ENST00000566851 833 ntBASIC18.7■□□□□ 0.58
IRX3P78415 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
IRX3P78415 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.7■□□□□ 0.58
IRX3P78415 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IRX3P78415 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
IRX3P78415 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.69■□□□□ 0.58
IRX3P78415 AL603756.1-201ENST00000606511 2163 ntBASIC18.69■□□□□ 0.58
IRX3P78415 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 AC060834.1-201ENST00000443027 2032 ntBASIC18.69■□□□□ 0.58
IRX3P78415 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
IRX3P78415 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 AC234783.1-201ENST00000441761 496 ntBASIC18.69■□□□□ 0.58
IRX3P78415 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.69■□□□□ 0.58
IRX3P78415 AC007389.4-201ENST00000454674 793 ntBASIC18.69■□□□□ 0.58
IRX3P78415 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.69■□□□□ 0.58
IRX3P78415 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IRX3P78415 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.69■□□□□ 0.58
IRX3P78415 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.69■□□□□ 0.58
IRX3P78415 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.69■□□□□ 0.58
IRX3P78415 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.69■□□□□ 0.58
IRX3P78415 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms