Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN2P57739 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.8■□□□□ 0.12
CLDN2P57739 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.8■□□□□ 0.12
CLDN2P57739 AC093726.1-201ENST00000608064 963 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 AC099568.2-201ENST00000609194 695 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CLDN2P57739 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.8■□□□□ 0.12
CLDN2P57739 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CLDN2P57739 AL662844.4-201ENST00000606367 2838 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.8■□□□□ 0.12
CLDN2P57739 AC092364.2-201ENST00000596710 2692 ntBASIC15.8■□□□□ 0.12
CLDN2P57739 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CLDN2P57739 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN2P57739 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN2P57739 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN2P57739 EEF1DP4-201ENST00000446006 880 ntBASIC15.79■□□□□ 0.12
CLDN2P57739 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN2P57739 AC011495.1-201ENST00000498085 584 ntBASIC15.79■□□□□ 0.12
CLDN2P57739 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN2P57739 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.79■□□□□ 0.12
CLDN2P57739 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CLDN2P57739 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.79■□□□□ 0.12
CLDN2P57739 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.79■□□□□ 0.12
CLDN2P57739 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.79■□□□□ 0.12
CLDN2P57739 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLDN2P57739 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
CLDN2P57739 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLDN2P57739 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.78■□□□□ 0.12
CLDN2P57739 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLDN2P57739 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
CLDN2P57739 HAUS4P1-201ENST00000406739 1145 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms