Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
WNT3AP56704 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
WNT3AP56704 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
WNT3AP56704 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
WNT3AP56704 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 AC105917.1-201ENST00000506637 2539 ntBASIC16.22■□□□□ 0.19
WNT3AP56704 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 FER1L4-210ENST00000615531 5998 ntBASIC16.22■□□□□ 0.19
WNT3AP56704 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.22■□□□□ 0.19
WNT3AP56704 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
WNT3AP56704 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.22■□□□□ 0.19
WNT3AP56704 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 MIR4453-201ENST00000584019 89 ntBASIC16.22■□□□□ 0.19
WNT3AP56704 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.22■□□□□ 0.19
WNT3AP56704 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 MIR6080-201ENST00000617359 66 ntBASIC16.22■□□□□ 0.19
WNT3AP56704 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.22■□□□□ 0.19
WNT3AP56704 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.22■□□□□ 0.19
WNT3AP56704 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
WNT3AP56704 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
WNT3AP56704 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.21■□□□□ 0.19
WNT3AP56704 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 REXO1L1P-202ENST00000608646 1974 ntBASIC16.21■□□□□ 0.19
WNT3AP56704 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.21■□□□□ 0.19
WNT3AP56704 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.21■□□□□ 0.19
WNT3AP56704 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 AC007967.4-201ENST00000614700 386 ntBASIC16.21■□□□□ 0.19
WNT3AP56704 LINC00628-201ENST00000628516 1289 ntBASIC16.21■□□□□ 0.19
WNT3AP56704 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.21■□□□□ 0.19
WNT3AP56704 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.21■□□□□ 0.19
WNT3AP56704 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
WNT3AP56704 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
WNT3AP56704 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
WNT3AP56704 AC018892.3-201ENST00000623986 2499 ntBASIC16.21■□□□□ 0.18
WNT3AP56704 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
WNT3AP56704 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
WNT3AP56704 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
WNT3AP56704 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
WNT3AP56704 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.2■□□□□ 0.18
WNT3AP56704 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
WNT3AP56704 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms