Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH8P55286 AL844908.2-201ENST00000609461 460 ntBASIC17.1■□□□□ 0.33
CDH8P55286 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH8P55286 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH8P55286 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH8P55286 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 EEF1DP4-201ENST00000446006 880 ntBASIC17.09■□□□□ 0.33
CDH8P55286 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 UGT1A2P-201ENST00000454886 866 ntBASIC17.09■□□□□ 0.33
CDH8P55286 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.09■□□□□ 0.33
CDH8P55286 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.09■□□□□ 0.33
CDH8P55286 AL033527.5-202ENST00000641632 1098 ntBASIC17.09■□□□□ 0.33
CDH8P55286 AC087499.5-201ENST00000452760 1342 ntBASIC17.09■□□□□ 0.33
CDH8P55286 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
CDH8P55286 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDH8P55286 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH8P55286 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH8P55286 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH8P55286 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH8P55286 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.08■□□□□ 0.33
CDH8P55286 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH8P55286 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CDH8P55286 AL365203.3-201ENST00000609742 2057 ntBASIC17.08■□□□□ 0.33
CDH8P55286 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH8P55286 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CDH8P55286 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH8P55286 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH8P55286 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH8P55286 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH8P55286 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH8P55286 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH8P55286 AC010336.2-201ENST00000564226 506 ntBASIC17.08■□□□□ 0.32
CDH8P55286 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms